EnhancerDB
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  3. rs796877566[chr1:19723280]
Enhancers that have rs796877566[chr1:19723280]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs796877566[chr1:19723280]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19723267 19723282 MEF2C JASPAR yes 27185148
chr1 19723268 19723283 MEF2A JASPAR yes 27185149
chr1 19723269 19723281 MEF2B JASPAR yes 27185150
chr1 19723269 19723281 MEF2D JASPAR yes 27185151
chr1 19723275 19723290 MEF2C JASPAR yes 27185152
chr1 19723275 19723296 IRF1 JASPAR yes 27185153
chr1 19723276 19723291 FOXP1 JASPAR yes 27185154
chr1 19723276 19723297 IRF1 JASPAR yes 27185155
chr1 19723277 19723292 FOXP1 JASPAR yes 27185156
chr1 19723278 19723293 FOXP1 JASPAR yes 27185157
chr1 19723279 19723294 FOXP1 JASPAR yes 27185158
chr1 19723279 19723300 IRF1 JASPAR yes 27185159
chr1 19723280 19723295 FOXP1 JASPAR yes 27185160
chr1 19723280 19723301 IRF1 JASPAR yes 27185161
Genes associated with rs796877566[chr1:19723280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More