EnhancerDB
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  3. rs796879662[chr1:24612766]
Enhancers that have rs796879662[chr1:24612766]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs796879662[chr1:24612766]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24612754 24612775 IRF1 JASPAR yes 27495985
chr1 24612760 24612781 IRF1 JASPAR yes 27495986
chr1 24612761 24612776 FOXP1 JASPAR yes 27495987
chr1 24612761 24612782 IRF1 JASPAR yes 27495988
chr1 24612762 24612773 FOXP2 JASPAR yes 27495989
chr1 24612762 24612777 STAT2 JASPAR yes 27495990
chr1 24612762 24612783 IRF1 JASPAR yes 27495991
chr1 24612763 24612778 FOXP1 JASPAR yes 27495992
chr1 24612763 24612784 IRF1 JASPAR yes 27495993
chr1 24612764 24612785 IRF1 JASPAR yes 27495994
chr1 24612765 24612780 FOXP1 JASPAR yes 27495995
chr1 24612766 24612781 FOXP1 JASPAR yes 27495996
Genes associated with rs796879662[chr1:24612766], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More