EnhancerDB
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  3. rs7978240[chr12:46604023]
Enhancers that have rs7978240[chr12:46604023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs7978240[chr12:46604023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46603516 46604146 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541014
chr12 46603516 46604146 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026884
chr12 46603525 46604115 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541015
chr12 46603525 46604115 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026885
chr12 46603615 46604299 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541017
chr12 46603615 46604299 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026887
chr12 46603616 46604034 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541018
chr12 46603616 46604034 NFIC UCSC Txn Factor no Conserved 108026888
chr12 46603616 46604034 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026889
chr12 46603616 46604132 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541019
chr12 46603616 46604132 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026890
chr12 46603661 46604045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541020
chr12 46603661 46604045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026891
chr12 46603707 46604063 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541025
chr12 46603707 46604063 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026898
chr12 46603717 46604037 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541028
chr12 46603717 46604037 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026901
chr12 46603717 46604097 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541029
chr12 46603717 46604097 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026902
chr12 46603719 46604029 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541030
chr12 46603719 46604029 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026903
chr12 46603736 46604056 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541033
chr12 46603736 46604056 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026907
chr12 46603741 46604311 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21541035
chr12 46603741 46604311 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108026910
chr12 46603748 46604028 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541036
chr12 46603748 46604028 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026911
chr12 46603761 46604071 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21541037
chr12 46603761 46604071 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108026912
chr12 46603767 46604209 ZNF274 GTRD no Liver (HepG2) 108026913
chr12 46603770 46604034 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541040
chr12 46603770 46604034 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026916
chr12 46603781 46604105 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541041
chr12 46603781 46604105 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026917
chr12 46603785 46604033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541043
chr12 46603785 46604033 TCF12 UCSC Txn Factor no Conserved 108026919
chr12 46603785 46604033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026920
chr12 46603785 46604084 ZNF274 GTRD no Liver (HepG2) 108026921
chr12 46603791 46604049 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541044
chr12 46603791 46604049 TCF3 UCSC Txn Factor no Conserved 108026922
chr12 46603791 46604049 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026923
chr12 46603807 46604183 ZNF143 GTRD no Epithelial (MCF-7) 21541045
chr12 46603807 46604183 ZNF143 GTRD no Epithelial (MCF-7) 108026924
chr12 46603867 46604337 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21541048
chr12 46603867 46604337 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108026927
chr12 46603926 46605045 ZNF143 GTRD no Epithelial (MCF-7) 21541049
chr12 46603926 46605045 ZNF143 GTRD no Epithelial (MCF-7) 108026928
chr12 46604012 46604029 RXRA JASPAR yes 120603491
chr12 46604012 46604033 REST JASPAR yes 120603492
Genes associated with rs7978240[chr12:46604023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More