EnhancerDB
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  3. rs79793801[chr1:226857566]
Enhancers that have rs79793801[chr1:226857566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79793801[chr1:226857566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226857551 226857571 RREB1 JASPAR yes 35830415
chr1 226857553 226857568 RUNX2 JASPAR yes 35830416
chr1 226857556 226857576 RREB1 JASPAR yes 35830417
chr1 226857562 226857582 RREB1 JASPAR yes 35830418
chr1 226857562 226857583 IRF1 JASPAR yes 35830419
chr1 226857563 226857578 FOXP1 JASPAR yes 35830420
chr1 226857563 226857584 IRF1 JASPAR yes 35830421
chr1 226857564 226857575 FOXP2 JASPAR yes 35830422
chr1 226857564 226857576 FOXC2 JASPAR yes 35830423
chr1 226857565 226857580 FOXP1 JASPAR yes 35830424
Genes associated with rs79793801[chr1:226857566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More