EnhancerDB
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  3. rs79796422[chr12:125190140]
Enhancers that have rs79796422[chr12:125190140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79796422[chr12:125190140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125190134 125190143 HIC2 JASPAR yes 124411260
chr12 125190136 125190143 SP1 TRANSFAC yes 124411261
chr12 125190136 125190146 SP1 JASPAR yes 124411262
chr12 125190136 125190146 SP1 TRANSFAC yes 124411263
chr12 125190137 125190144 SP1 TRANSFAC yes 124411264
chr12 125190138 125190143 SP1 TRANSFAC yes 124411265
chr12 125190138 125190144 SP1 TRANSFAC yes 124411266
chr12 125190138 125190145 SP1 TRANSFAC yes 124411267
chr12 125190139 125190153 GLIS2 JASPAR yes 124411268
Genes associated with rs79796422[chr12:125190140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More