EnhancerDB
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  3. rs79809525[chr1:218654478]
Enhancers that have rs79809525[chr1:218654478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218644305 218676855 enh12672
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs79809525[chr1:218654478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218653475 218654624 EP300 UCSC Txn Factor no Conserved 107870381
chr1 218653475 218654624 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107870382
chr1 218653573 218654523 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107870383
chr1 218653573 218654527 TCF12 UCSC Txn Factor no Conserved 107870384
chr1 218653573 218654527 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107870385
chr1 218653835 218654518 GATA3 UCSC Txn Factor no Conserved 107870388
chr1 218653986 218654482 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21380834
chr1 218653986 218654482 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107870396
chr1 218654040 218654510 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21380836
chr1 218654040 218654510 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107870399
chr1 218654046 218654530 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107870400
chr1 218654051 218654490 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107870401
chr1 218654242 218654486 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21380841
chr1 218654242 218654486 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107870416
Genes associated with rs79809525[chr1:218654478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More