EnhancerDB
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  3. rs79824617[chr5:77794627]
Enhancers that have rs79824617[chr5:77794627]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs79824617[chr5:77794627]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77794612 77794627 MEF2A JASPAR yes 63592909
chr5 77794618 77794629 CDX2 JASPAR yes 63592910
chr5 77794619 77794630 HOXA10 JASPAR yes 63592911
chr5 77794620 77794629 CDX1 JASPAR yes 63592912
chr5 77794620 77794630 HOXA13 JASPAR yes 63592913
chr5 77794620 77794630 HOXB13 JASPAR yes 63592914
chr5 77794620 77794630 HOXD13 JASPAR yes 63592915
Genes associated with rs79824617[chr5:77794627], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More