EnhancerDB
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  3. rs79880162[chr1:9220952]
Enhancers that have rs79880162[chr1:9220952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9220009 9228971 enh11480
Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs79880162[chr1:9220952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9220946 9220952 TBP TRANSFAC yes 26623804
chr1 9220948 9220964 SOX8 JASPAR yes 26623805
chr1 9220949 9220964 FOXA1 JASPAR yes 26623806
chr1 9220951 9220963 FOXC2 JASPAR yes 26623807
chr1 9220951 9220965 FOXF2 JASPAR yes 26623808
chr1 9220952 9220960 FOXD1 JASPAR yes 26623809
chr1 9220952 9220960 FOXG1 JASPAR yes 26623810
chr1 9220952 9220960 FOXO3 JASPAR yes 26623811
chr1 9220952 9220963 FOXC1 JASPAR yes 26623812
Genes associated with rs79880162[chr1:9220952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More