EnhancerDB
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  3. rs79888239[chr19:2630574]
Enhancers that have rs79888239[chr19:2630574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs79888239[chr19:2630574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2629021 2632276 ZNF274 GTRD no Blood (GM12878) 21838049
chr19 2629021 2632276 ZNF274 GTRD no Blood (GM12878) 108363827
chr19 2630561 2630580 CTCF JASPAR yes 112086001
chr19 2630565 2630584 REST JASPAR yes 112086002
chr19 2630574 2630586 PKNOX1 JASPAR yes 112086004
chr19 2630574 2630586 PKNOX2 JASPAR yes 112086005
chr19 2630574 2630586 TGIF1 JASPAR yes 112086006
chr19 2630574 2630586 TGIF2 JASPAR yes 112086007
Genes associated with rs79888239[chr19:2630574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More