EnhancerDB
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  3. rs79895816[chr12:109077887]
Enhancers that have rs79895816[chr12:109077887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109075725 109093399 enh14973
Bone Marrow (K562) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79895816[chr12:109077887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109077873 109077893 RREB1 JASPAR yes 123612154
chr12 109077874 109077888 ONECUT2 JASPAR yes 123612155
chr12 109077874 109077888 ONECUT3 JASPAR yes 123612156
chr12 109077875 109077890 FOXA1 JASPAR yes 123612158
chr12 109077876 109077887 FOXC1 JASPAR yes 123612159
chr12 109077876 109077888 FOXC2 JASPAR yes 123612160
chr12 109077883 109077901 NFYA JASPAR yes 123612161
chr12 109077885 109077897 FOXI1 JASPAR yes 123612162
Genes associated with rs79895816[chr12:109077887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More