EnhancerDB
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  3. rs79947000[chr1:43990466]
Enhancers that have rs79947000[chr1:43990466]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43989845 44027077 enh11814
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs79947000[chr1:43990466]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43990459 43990469 GSC2 JASPAR yes 28502311
chr1 43990460 43990468 OTX1 JASPAR yes 28502312
chr1 43990460 43990468 OTX2 JASPAR yes 28502313
Genes associated with rs79947000[chr1:43990466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More