EnhancerDB
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  3. rs79972851[chr1:39602734]
Enhancers that have rs79972851[chr1:39602734]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79972851[chr1:39602734]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39602724 39602735 FOXC1 JASPAR yes 28256567
chr1 39602732 39602745 DUXA JASPAR yes 28256569
chr1 39602733 39602744 DUX4 JASPAR yes 28256570
chr1 39602733 39602744 PHOX2A JASPAR yes 28256571
chr1 39602733 39602744 PROP1 JASPAR yes 28256572
Genes associated with rs79972851[chr1:39602734], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More