EnhancerDB
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  3. rs79992965[chr1:39602750]
Enhancers that have rs79992965[chr1:39602750]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79992965[chr1:39602750]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39602737 39602750 DUXA JASPAR yes 28256573
chr1 39602743 39602754 DUX4 JASPAR yes 28256577
chr1 39602743 39602754 PHOX2A JASPAR yes 28256578
chr1 39602743 39602754 PROP1 JASPAR yes 28256579
chr1 39602746 39602758 MEF2A JASPAR yes 28256580
chr1 39602748 39602759 PROP1 JASPAR yes 28256581
chr1 39602750 39602765 MEF2A JASPAR yes 28256582
Genes associated with rs79992965[chr1:39602750], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More