EnhancerDB
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  3. rs80004965[chr1:171407496]
Enhancers that have rs80004965[chr1:171407496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs80004965[chr1:171407496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171407483 171407497 TCF7L2 JASPAR yes 33081093
chr1 171407484 171407499 FOXP1 JASPAR yes 33081094
chr1 171407484 171408034 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349714
chr1 171407484 171408034 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845440
chr1 171407487 171407498 FOXP2 JASPAR yes 33081095
chr1 171407488 171407496 FOXO3 JASPAR yes 33081096
chr1 171407489 171407498 SRY JASPAR yes 33081097
chr1 171407491 171407500 SOX9 JASPAR yes 33081098
chr1 171407491 171407505 ONECUT2 JASPAR yes 33081099
chr1 171407492 171407508 SOX8 JASPAR yes 33081100
Genes associated with rs80004965[chr1:171407496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More