EnhancerDB
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  3. rs80021046[chr12:109057685]
Enhancers that have rs80021046[chr12:109057685]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109055765 109067015 enh2584
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs80021046[chr12:109057685]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109057679 109057689 ALX3 JASPAR yes 123610253
chr12 109057679 109057689 EN2 JASPAR yes 123610254
chr12 109057679 109057689 ESX1 JASPAR yes 123610255
chr12 109057679 109057689 GBX2 JASPAR yes 123610256
chr12 109057679 109057689 GSX1 JASPAR yes 123610257
chr12 109057679 109057689 GSX2 JASPAR yes 123610258
chr12 109057679 109057689 LBX2 JASPAR yes 123610259
chr12 109057679 109057689 LHX2 JASPAR yes 123610260
chr12 109057680 109057688 BARX1 JASPAR yes 123610261
chr12 109057680 109057688 BSX JASPAR yes 123610262
chr12 109057680 109057688 DLX6 JASPAR yes 123610263
chr12 109057680 109057688 ISX JASPAR yes 123610264
chr12 109057680 109057688 LBX1 JASPAR yes 123610265
chr12 109057680 109057688 LHX9 JASPAR yes 123610266
chr12 109057680 109057688 MSX1 JASPAR yes 123610267
chr12 109057680 109057688 MSX2 JASPAR yes 123610268
chr12 109057680 109057688 NKX6-2 JASPAR yes 123610269
chr12 109057680 109057688 PRRX1 JASPAR yes 123610270
chr12 109057680 109057688 RAX2 JASPAR yes 123610271
chr12 109057680 109057688 SHOX JASPAR yes 123610272
chr12 109057680 109057688 UNCX JASPAR yes 123610273
chr12 109057685 109057690 TFAP2A TRANSFAC yes 123610274
chr12 109057685 109057691 MZF1 JASPAR yes 123610275
Genes associated with rs80021046[chr12:109057685], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More