EnhancerDB
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  3. rs80038561[chr6:34625649]
Enhancers that have rs80038561[chr6:34625649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34618105 34636675 enh9069
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs80038561[chr6:34625649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34623905 34625770 POLR2A UCSC Txn Factor no Conserved 108539803
chr6 34623905 34625770 POLR2A UCSC Txn Factor no Conserved 108539804
chr6 34625224 34625742 MAFK UCSC Txn Factor no Conserved 108539814
chr6 34625231 34625736 MAFF UCSC Txn Factor no Conserved 108539815
chr6 34625645 34625666 REST JASPAR yes 101229193
chr6 34625646 34625665 REST JASPAR yes 101229194
Genes associated with rs80038561[chr6:34625649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More