EnhancerDB
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  3. rs80099297[chr6:29935189]
Enhancers that have rs80099297[chr6:29935189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs80099297[chr6:29935189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29935174 29935192 SRF JASPAR yes 101018922
chr6 29935176 29935191 MEF2C JASPAR yes 101018924
chr6 29935177 29935192 MEF2A JASPAR yes 101018925
chr6 29935177 29935198 IRF1 JASPAR yes 101018926
chr6 29935179 29935200 IRF1 JASPAR yes 101018927
chr6 29935183 29935198 FOXP1 JASPAR yes 101018929
chr6 29935183 29935204 IRF1 JASPAR yes 101018930
chr6 29935184 29935199 FOXP1 JASPAR yes 101018931
chr6 29935184 29935205 IRF1 JASPAR yes 101018932
chr6 29935185 29935206 IRF1 JASPAR yes 101018933
Genes associated with rs80099297[chr6:29935189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More