EnhancerDB
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  3. rs80146578[chr17:78639323]
Enhancers that have rs80146578[chr17:78639323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs80146578[chr17:78639323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78639303 78639324 IRF1 JASPAR yes 56264968
chr17 78639308 78639329 IRF1 JASPAR yes 56264970
chr17 78639310 78639325 PRDM1 JASPAR yes 56264972
chr17 78639314 78639331 RARA JASPAR yes 56264973
Genes associated with rs80146578[chr17:78639323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More