EnhancerDB
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  3. rs80196848[chr6:16339655]
Enhancers that have rs80196848[chr6:16339655]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs80196848[chr6:16339655]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16339648 16339667 CTCF JASPAR yes 100289376
chr6 16339653 16339663 ID4 JASPAR yes 100289377
chr6 16339653 16339663 TCF4 JASPAR yes 100289378
chr6 16339655 16339666 TBX2 JASPAR yes 100289379
Genes associated with rs80196848[chr6:16339655], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More