EnhancerDB
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  3. rs80254273[chr15:42216283]
Enhancers that have rs80254273[chr15:42216283]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs80254273[chr15:42216283]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42216267 42216283 ZNF143 JASPAR yes 23005747
chr15 42216281 42216288 JUN TRANSFAC yes 23005748
chr15 42216281 42216288 SP1 TRANSFAC yes 23005749
Genes associated with rs80254273[chr15:42216283], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More