EnhancerDB
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  3. rs80290587[chr3:150067230]
Enhancers that have rs80290587[chr3:150067230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 150057777 150071992 enh21028
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs80290587[chr3:150067230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 150067220 150067232 PKNOX1 JASPAR yes 6566132
chr3 150067220 150067232 PKNOX2 JASPAR yes 6566133
chr3 150067220 150067232 TGIF1 JASPAR yes 6566134
chr3 150067220 150067232 TGIF2 JASPAR yes 6566135
chr3 150067226 150067230 NFE TRANSFAC yes 6566136
chr3 150067226 150067239 SMAD2 JASPAR yes 6566137
Genes associated with rs80290587[chr3:150067230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More