EnhancerDB
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  3. rs80310564[chr17:57837203]
Enhancers that have rs80310564[chr17:57837203]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs80310564[chr17:57837203]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 21775327
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 108276471
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 108276472
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 108276473
chr17 57836889 57837996 AR GTRD no Prostate (PC-3) 21775472
chr17 57836889 57837996 AR GTRD no Prostate (PC-3) 108276689
chr17 57836896 57839878 ZNF274 GTRD no Liver (HepG2) 21775473
chr17 57836896 57839878 ZNF274 GTRD no Liver (HepG2) 108276690
chr17 57837184 57837205 IRF1 JASPAR yes 55078418
chr17 57837186 57837207 IRF1 JASPAR yes 55078421
chr17 57837191 57837212 ZNF263 JASPAR yes 55078422
chr17 57837194 57837215 ZNF263 JASPAR yes 55078423
chr17 57837202 57837221 CTCF JASPAR yes 55078424
Genes associated with rs80310564[chr17:57837203], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More