EnhancerDB
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  3. rs80326346[chr2:27932954]
Enhancers that have rs80326346[chr2:27932954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27922526 27936875 enh18375
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs80326346[chr2:27932954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27932941 27932956 HNF4A JASPAR yes 72583812
chr2 27932942 27932956 RXRB JASPAR yes 72583813
chr2 27932942 27932956 RXRG JASPAR yes 72583814
chr2 27932942 27932957 HNF4G JASPAR yes 72583815
chr2 27932942 27932957 LEF1 JASPAR yes 72583816
chr2 27932943 27932957 TCF7L2 JASPAR yes 72583818
Genes associated with rs80326346[chr2:27932954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More