EnhancerDB
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Enhancers that have rs8042005[chr15:59586849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 59580969 59601625 enh16190
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs8042005[chr15:59586849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 59586523 59588062 ZNF274 GTRD no Cervix (HeLa-S3) 21655662
chr15 59586523 59588062 ZNF274 GTRD no Cervix (HeLa-S3) 108141553
chr15 59586700 59587818 ZNF274 GTRD no Cervix (HeLa-S3) 21655663
chr15 59586700 59587818 ZNF274 GTRD no Cervix (HeLa-S3) 108141554
chr15 59586751 59588010 ZNF274 GTRD no Cervix (HeLa-S3) 21655664
chr15 59586751 59588010 ZNF274 GTRD no Cervix (HeLa-S3) 108141555
chr15 59586767 59587965 ZNF274 GTRD no Cervix (HeLa-S3) 21655665
chr15 59586767 59587965 ZNF274 GTRD no Cervix (HeLa-S3) 108141556
chr15 59586793 59587968 ZNF143 GTRD no Epithelial (MCF-7) 108141557
chr15 59586824 59587735 TCF7L2 GTRD no Colon (HCT116) 21655666
chr15 59586824 59587735 TCF7L2 GTRD no Colon (HCT116) 108141558
chr15 59586824 59587896 ZNF274 GTRD no Cervix (HeLa-S3) 21655667
chr15 59586824 59587896 ZNF274 GTRD no Cervix (HeLa-S3) 108141559
chr15 59586826 59587706 AR GTRD no Prostate (PC-3) 21655668
chr15 59586826 59587706 AR GTRD no Prostate (PC-3) 108141560
chr15 59586828 59587723 ZNF143 GTRD no Epithelial (MCF-7) 108141561
chr15 59586833 59587363 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21655669
chr15 59586833 59587363 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108141562
chr15 59586846 59587914 TCF7L2 GTRD no Colon (HCT116) 21655670
chr15 59586846 59587914 TCF7L2 GTRD no Colon (HCT116) 108141563
chr15 59586847 59586861 GLIS2 JASPAR yes 23725323
chr15 59586847 59586861 GLIS3 JASPAR yes 23725324
Genes associated with rs8042005[chr15:59586849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More