EnhancerDB
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  3. rs8047820[chr16:88823665]
Enhancers that have rs8047820[chr16:88823665]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs8047820[chr16:88823665]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 21736869
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 108223300
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 21736870
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 108223301
chr16 88823650 88823671 ZNF263 JASPAR yes 12300385
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 21736871
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 108223302
chr16 88823656 88823671 ZBTB33 JASPAR yes 12300387
Genes associated with rs8047820[chr16:88823665], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More