EnhancerDB
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  3. rs812798[chr12:52366539]
Enhancers that have rs812798[chr12:52366539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52362566 52373215 enh14724
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs812798[chr12:52366539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52366410 52366768 ZNF143 GTRD no Epithelial (MCF-7) 108032728
chr12 52366427 52367077 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21545908
chr12 52366427 52367077 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032729
chr12 52366443 52366993 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21545909
chr12 52366443 52366993 GATA2 UCSC Txn Factor no Conserved 108032730
chr12 52366443 52366993 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032731
chr12 52366465 52367041 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21545910
chr12 52366465 52367041 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032732
chr12 52366493 52366843 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21545911
chr12 52366493 52366843 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032733
chr12 52366518 52366878 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21545912
chr12 52366518 52366878 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032734
chr12 52366528 52366540 ZBTB7C JASPAR yes 120911378
chr12 52366537 52367033 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21545913
chr12 52366537 52367033 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032735
Genes associated with rs812798[chr12:52366539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More