EnhancerDB
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  3. rs819517[chr6:47052416]
Enhancers that have rs819517[chr6:47052416]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47048805 47068805 enh23286
Liver Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs819517[chr6:47052416]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47052410 47052420 TBX21 JASPAR yes 101995292
chr6 47052410 47052421 TBX20 JASPAR yes 101995293
chr6 47052410 47052421 TBX2 JASPAR yes 101995294
chr6 47052410 47052423 EOMES JASPAR yes 101995295
chr6 47052411 47052419 MGA JASPAR yes 101995296
chr6 47052411 47052419 TBX15 JASPAR yes 101995297
chr6 47052411 47052419 TBX1 JASPAR yes 101995298
chr6 47052411 47052419 TBX4 JASPAR yes 101995299
chr6 47052411 47052419 TBX5 JASPAR yes 101995300
chr6 47052411 47052421 TBR1 JASPAR yes 101995301
Genes associated with rs819517[chr6:47052416], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More