EnhancerDB
  1. Home
  2. SNP
  3. rs838855[chr12:125204626]
Enhancers that have rs838855[chr12:125204626]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs838855[chr12:125204626]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125203671 125204675 AR GTRD no Prostate (PC-3) 21582307
chr12 125204474 125204678 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582310
chr12 125204559 125205035 CTCF UCSC Txn Factor no Conserved 108069598
chr12 125204618 125204626 ISL2 JASPAR yes 124413163
chr12 125204621 125204638 RARA JASPAR yes 124413164
chr12 125204621 125204638 RXRA JASPAR yes 124413165
Genes associated with rs838855[chr12:125204626], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More