EnhancerDB
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  3. rs838860[chr12:125209751]
Enhancers that have rs838860[chr12:125209751]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs838860[chr12:125209751]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125209329 125209857 ZNF274 GTRD no Blood (GM12878) 21582348
chr12 125209375 125209780 ZNF274 GTRD no Blood (GM12878) 21582349
chr12 125209403 125209883 SOX2 GTRD no Neural Stem Cells (H9) 21582350
Genes associated with rs838860[chr12:125209751], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More