EnhancerDB
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  3. rs838918[chr12:125238811]
Enhancers that have rs838918[chr12:125238811]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs838918[chr12:125238811]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125238522 125238962 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582862
chr12 125238801 125238811 FIGLA JASPAR yes 124418001
chr12 125238801 125238811 TCF4 JASPAR yes 124418002
chr12 125238801 125238822 ZNF263 JASPAR yes 124418003
chr12 125238802 125238811 SNAI2 JASPAR yes 124418004
chr12 125238803 125238824 IRF1 JASPAR yes 124418006
Genes associated with rs838918[chr12:125238811], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More