EnhancerDB
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  3. rs838922[chr12:125233661]
Enhancers that have rs838922[chr12:125233661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs838922[chr12:125233661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125233160 125233786 ZNF274 GTRD no Bone Marrow (K562) 21582725
chr12 125233169 125233792 ZNF274 GTRD no Bone Marrow (K562) 21582726
chr12 125233183 125233902 ZNF274 GTRD no Bone Marrow (K562) 21582727
chr12 125233257 125233790 ZNF274 GTRD no Bone Marrow (K562) 21582728
chr12 125233270 125233727 ZNF274 GTRD no Bone Marrow (K562) 21582729
chr12 125233280 125233707 ZNF274 GTRD no Bone Marrow (K562) 21582731
chr12 125233334 125233804 ZNF274 GTRD no Bone Marrow (K562) 21582735
chr12 125233654 125233665 E2F4 JASPAR yes 124417297
chr12 125233654 125233665 E2F6 JASPAR yes 124417298
chr12 125233654 125233668 E2F7 JASPAR yes 124417299
chr12 125233655 125233666 E2F1 JASPAR yes 124417300
chr12 125233658 125233672 PLAG1 JASPAR yes 124417301
Genes associated with rs838922[chr12:125233661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More