EnhancerDB
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  3. rs838930[chr12:125194596]
Enhancers that have rs838930[chr12:125194596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs838930[chr12:125194596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125193719 125194629 ZBTB33 GTRD no Lung (A549) 21582116
chr12 125193758 125194657 ZBTB33 GTRD no Lung (A549) 21582118
chr12 125193793 125195570 ZBTB33 GTRD no Brain (SK-N-SH) 21582123
chr12 125193903 125194739 ZBTB33 GTRD no Brain (SK-N-SH) 21582134
chr12 125193930 125194667 ZNF274 GTRD no Bone Marrow (K562) 21582136
chr12 125193959 125194798 TCF7L2 GTRD no Colon (HCT116) 21582137
chr12 125194052 125194608 ZBTB33 GTRD no Brain (SK-N-SH) 21582138
chr12 125194064 125194659 ZBTB33 GTRD no Brain (SK-N-SH) 21582139
chr12 125194091 125194682 ZBTB33 GTRD no Brain (SK-N-SH) 21582141
chr12 125194110 125194653 ZBTB33 GTRD no Brain (SK-N-SH) 21582143
chr12 125194158 125194743 TCF7L2 GTRD no Colon (HCT116) 21582145
chr12 125194223 125194623 ZNF143 GTRD no Epithelial (MCF-7) 21582150
chr12 125194329 125196454 ZNF274 GTRD no Bone Marrow (K562) 21582151
chr12 125194549 125194813 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582152
Genes associated with rs838930[chr12:125194596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More