EnhancerDB
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  3. rs838934[chr12:125189166]
Enhancers that have rs838934[chr12:125189166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs838934[chr12:125189166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125188009 125189194 AR GTRD no Prostate (PC-3) 21582083
chr12 125188009 125189194 AR GTRD no Prostate (PC-3) 108069534
chr12 125189155 125189167 HES5 JASPAR yes 124411123
chr12 125189155 125189167 HES7 JASPAR yes 124411124
chr12 125189155 125189167 PKNOX1 JASPAR yes 124411125
chr12 125189155 125189167 PKNOX2 JASPAR yes 124411126
chr12 125189155 125189167 TGIF2 JASPAR yes 124411127
chr12 125189156 125189166 HEY2 JASPAR yes 124411129
chr12 125189156 125189166 ID4 JASPAR yes 124411130
chr12 125189156 125189166 TCF4 JASPAR yes 124411131
Genes associated with rs838934[chr12:125189166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More