EnhancerDB
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  3. rs850295[chr1:234638599]
Enhancers that have rs850295[chr1:234638599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs850295[chr1:234638599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234638296 234640396 ZNF274 GTRD no Liver (HepG2) 21393522
chr1 234638296 234640396 ZNF274 GTRD no Liver (HepG2) 107880067
chr1 234638298 234640490 ZNF274 GTRD no Liver (HepG2) 21393523
chr1 234638298 234640490 ZNF274 GTRD no Liver (HepG2) 107880068
chr1 234638328 234640463 ZNF274 GTRD no Liver (HepG2) 21393524
chr1 234638328 234640463 ZNF274 GTRD no Liver (HepG2) 107880069
chr1 234638453 234640289 ZBTB33 GTRD no Lung (A549) 107880070
chr1 234638498 234638778 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393525
chr1 234638518 234640627 ZBTB33 GTRD no Lung (A549) 107880071
chr1 234638537 234639710 ZNF274 GTRD no Liver (HepG2) 21393526
chr1 234638556 234639820 ZNF274 GTRD no Liver (HepG2) 21393527
chr1 234638563 234639621 ZNF274 GTRD no Liver (HepG2) 21393528
chr1 234638575 234639656 ZNF143 GTRD no Epithelial (MCF-7) 21393529
chr1 234638579 234639616 ZNF143 GTRD no Epithelial (MCF-7) 21393530
chr1 234638580 234640751 ZBTB33 GTRD no Lung (A549) 107880072
chr1 234638587 234639717 ZNF274 GTRD no Liver (HepG2) 21393531
chr1 234638595 234638885 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393532
chr1 234638599 234638605 ZNF354C JASPAR yes 36280011
chr1 234638599 234639724 ZNF143 GTRD no Epithelial (MCF-7) 21393533
Genes associated with rs850295[chr1:234638599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More