EnhancerDB
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  3. rs868288[chr1:230241124]
Enhancers that have rs868288[chr1:230241124]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs868288[chr1:230241124]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230240593 230241209 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391358
chr1 230240593 230241209 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878566
chr1 230240890 230241180 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391368
chr1 230240890 230241180 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878577
chr1 230241117 230241132 SOX21 JASPAR yes 36020983
chr1 230241123 230241137 ONECUT3 JASPAR yes 36020984
Genes associated with rs868288[chr1:230241124], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More