EnhancerDB
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  3. rs879778[chr17:48987140]
Enhancers that have rs879778[chr17:48987140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs879778[chr17:48987140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48986549 48987199 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770674
chr17 48986620 48987236 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770680
chr17 48986748 48987312 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770701
chr17 48987121 48987431 ZNF274 GTRD no Bone Marrow (K562) 21770703
chr17 48987123 48987144 ZNF263 JASPAR yes 54732461
chr17 48987128 48987142 PLAG1 JASPAR yes 54732462
chr17 48987129 48987143 PLAG1 JASPAR yes 54732463
chr17 48987136 48987140 H4TF2 TRANSFAC yes 54732464
Genes associated with rs879778[chr17:48987140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More