EnhancerDB
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  3. rs886424[chr6:30782002]
Enhancers that have rs886424[chr6:30782002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs886424[chr6:30782002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30781987 30782004 RXRA JASPAR yes 101053928
chr6 30781996 30782005 ZEB1 JASPAR yes 101053930
chr6 30781999 30782004 USF2 TRANSFAC yes 101053931
Genes associated with rs886424[chr6:30782002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More