EnhancerDB
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  3. rs892301[chr17:65478128]
Enhancers that have rs892301[chr17:65478128]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
chr17 65477756 65478333 vista25646
VISTA
Transcript factors that have rs892301[chr17:65478128]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65477877 65478473 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782279
chr17 65477877 65478473 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285952
chr17 65478054 65478344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782280
chr17 65478054 65478344 NFATC1 UCSC Txn Factor no Conserved 108285953
chr17 65478054 65478344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285954
chr17 65478122 65478136 STAT1 JASPAR yes 21280008
chr17 65478122 65478136 STAT1 JASPAR yes 55509883
chr17 65478122 65478137 STAT2 JASPAR yes 21280009
chr17 65478122 65478137 STAT2 JASPAR yes 55509884
Genes associated with rs892301[chr17:65478128], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More