EnhancerDB
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Enhancers that have rs894622[chr17:55541080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs894622[chr17:55541080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55539307 55541179 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773526
chr17 55539307 55541179 POLR2A UCSC Txn Factor no Conserved 108274069
chr17 55539307 55541179 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274070
chr17 55540218 55541376 ZBTB33 GTRD no Lung (A549) 21773528
chr17 55540218 55541376 ZBTB33 GTRD no Lung (A549) 108274072
chr17 55540274 55541310 ZBTB33 GTRD no Lung (A549) 21773529
chr17 55540274 55541310 ZBTB33 GTRD no Lung (A549) 108274073
chr17 55540289 55541366 ZBTB33 GTRD no Lung (A549) 21773531
chr17 55540289 55541366 ZBTB33 GTRD no Lung (A549) 108274075
chr17 55540322 55541084 ZBTB33 GTRD no Lung (A549) 21773532
chr17 55540322 55541084 ZBTB33 GTRD no Lung (A549) 108274076
chr17 55540328 55541147 ZBTB33 GTRD no Lung (A549) 21773533
chr17 55540328 55541147 ZBTB33 GTRD no Lung (A549) 108274077
chr17 55540384 55541332 ZBTB33 GTRD no Lung (A549) 21773534
chr17 55540384 55541332 ZBTB33 GTRD no Lung (A549) 108274078
chr17 55540389 55541167 ZBTB33 GTRD no Lung (A549) 21773535
chr17 55540389 55541167 ZBTB33 GTRD no Lung (A549) 108274079
chr17 55540412 55541121 ZBTB33 GTRD no Brain (SK-N-SH) 21773536
chr17 55540412 55541121 ZBTB33 GTRD no Brain (SK-N-SH) 108274080
chr17 55540414 55541186 ZBTB33 GTRD no Lung (A549) 21773538
chr17 55540414 55541186 ZBTB33 GTRD no Lung (A549) 108274082
chr17 55540448 55541147 ZBTB33 GTRD no Brain (SK-N-SH) 21773540
chr17 55540448 55541147 ZBTB33 GTRD no Brain (SK-N-SH) 108274084
chr17 55540449 55541235 ZBTB33 GTRD no Lung (A549) 21773541
chr17 55540449 55541235 ZBTB33 GTRD no Lung (A549) 108274085
chr17 55540454 55541126 ZBTB33 GTRD no Brain (SK-N-SH) 21773543
chr17 55540454 55541126 ZBTB33 GTRD no Brain (SK-N-SH) 108274087
chr17 55540471 55541111 ZBTB33 GTRD no Brain (SK-N-SH) 21773544
chr17 55540471 55541111 ZBTB33 GTRD no Brain (SK-N-SH) 108274088
chr17 55540478 55541137 ZBTB33 GTRD no Lung (A549) 21773545
chr17 55540478 55541137 ZBTB33 GTRD no Lung (A549) 108274089
chr17 55540486 55541111 ZBTB33 GTRD no Brain (SK-N-SH) 21773546
chr17 55540486 55541111 ZBTB33 GTRD no Brain (SK-N-SH) 108274090
chr17 55540498 55541124 ZBTB33 GTRD no Lung (A549) 21773549
chr17 55540498 55541124 ZBTB33 GTRD no Lung (A549) 108274094
chr17 55540505 55541254 ZNF274 GTRD no Cervix (HeLa-S3) 21773550
chr17 55540505 55541254 ZNF274 GTRD no Cervix (HeLa-S3) 108274095
chr17 55540508 55541135 ZBTB33 GTRD no Lung (A549) 21773551
chr17 55540508 55541135 ZBTB33 GTRD no Lung (A549) 108274096
chr17 55540520 55541081 ZBTB33 GTRD no Brain (SK-N-SH) 21773554
chr17 55540520 55541081 ZBTB33 GTRD no Brain (SK-N-SH) 108274100
chr17 55540524 55541116 ZBTB33 GTRD no Brain (SK-N-SH) 21773556
chr17 55540524 55541116 ZBTB33 GTRD no Brain (SK-N-SH) 108274103
chr17 55540526 55541120 ZBTB33 GTRD no Brain (SK-N-SH) 21773557
chr17 55540526 55541120 ZBTB33 GTRD no Brain (SK-N-SH) 108274104
chr17 55540528 55541091 ZBTB33 GTRD no Brain (SK-N-SH) 21773558
chr17 55540528 55541091 ZBTB33 GTRD no Brain (SK-N-SH) 108274105
chr17 55540536 55541138 ZBTB33 GTRD no Lung (A549) 21773560
chr17 55540536 55541138 ZBTB33 GTRD no Lung (A549) 108274107
chr17 55540540 55541118 ZBTB33 GTRD no Lung (A549) 21773561
chr17 55540540 55541118 ZBTB33 GTRD no Lung (A549) 108274108
chr17 55540542 55541145 ZBTB33 GTRD no Lung (A549) 21773562
chr17 55540542 55541145 ZBTB33 GTRD no Lung (A549) 108274109
chr17 55540547 55541111 ZBTB33 GTRD no Brain (SK-N-SH) 21773565
chr17 55540547 55541111 ZBTB33 GTRD no Brain (SK-N-SH) 108274112
chr17 55540553 55541151 ZBTB33 GTRD no Lung (A549) 21773570
chr17 55540553 55541151 ZBTB33 GTRD no Lung (A549) 108274119
chr17 55540555 55541153 ZBTB33 GTRD no Brain (SK-N-SH) 21773571
chr17 55540555 55541153 ZBTB33 GTRD no Brain (SK-N-SH) 108274120
chr17 55540561 55541122 ZBTB33 GTRD no Brain (SK-N-SH) 21773574
chr17 55540561 55541122 ZBTB33 GTRD no Brain (SK-N-SH) 108274123
chr17 55540565 55541108 ZBTB33 GTRD no Brain (SK-N-SH) 21773577
chr17 55540565 55541108 ZBTB33 GTRD no Brain (SK-N-SH) 108274126
chr17 55540572 55541120 ZBTB33 GTRD no Lung (A549) 21773579
chr17 55540572 55541120 ZBTB33 GTRD no Lung (A549) 108274128
chr17 55540572 55541162 ZBTB33 GTRD no Brain (SK-N-SH) 21773580
chr17 55540572 55541162 ZBTB33 GTRD no Brain (SK-N-SH) 108274129
chr17 55540594 55541139 ZBTB33 GTRD no Lung (A549) 21773582
chr17 55540594 55541139 ZBTB33 GTRD no Lung (A549) 108274131
chr17 55540652 55541098 ZNF274 GTRD no Liver (HepG2) 21773590
chr17 55540652 55541098 ZNF274 GTRD no Liver (HepG2) 108274139
chr17 55540664 55541188 ZBTB33 GTRD no Lung (A549) 21773592
chr17 55540664 55541188 ZBTB33 GTRD no Lung (A549) 108274141
chr17 55540684 55541132 ZBTB33 GTRD no Lung (A549) 21773593
chr17 55540684 55541132 ZBTB33 GTRD no Lung (A549) 108274142
chr17 55540702 55541135 ZNF274 GTRD no Cervix (HeLa-S3) 21773594
chr17 55540702 55541135 ZNF274 GTRD no Cervix (HeLa-S3) 108274143
chr17 55540710 55541082 ZBTB33 GTRD no Brain (SK-N-SH) 21773596
chr17 55540710 55541082 ZBTB33 GTRD no Brain (SK-N-SH) 108274145
chr17 55540726 55541101 ZNF274 GTRD no Liver (HepG2) 21773599
chr17 55540726 55541101 ZNF274 GTRD no Liver (HepG2) 108274148
chr17 55540744 55541119 ZBTB33 GTRD no Brain (SK-N-SH) 21773601
chr17 55540744 55541119 ZBTB33 GTRD no Brain (SK-N-SH) 108274150
chr17 55540762 55541098 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773603
chr17 55540762 55541098 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274152
chr17 55540762 55541142 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773604
chr17 55540762 55541142 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274153
chr17 55540762 55541198 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773605
chr17 55540762 55541198 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274154
chr17 55540782 55541182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773606
chr17 55540782 55541182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274155
chr17 55540784 55541112 ZBTB33 GTRD no Brain (SK-N-SH) 21773607
chr17 55540784 55541112 ZBTB33 GTRD no Brain (SK-N-SH) 108274156
chr17 55541069 55541083 ZIC1 JASPAR yes 54957483
chr17 55541076 55541097 REST JASPAR yes 54957484
chr17 55541078 55541093 TFAP2C JASPAR yes 54957485
chr17 55541080 55541086 NFE2 TRANSFAC yes 54957486
chr17 55541080 55541092 INSM1 JASPAR yes 54957487
Genes associated with rs894622[chr17:55541080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More