EnhancerDB
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  3. rs908320[chr1:235061973]
Enhancers that have rs908320[chr1:235061973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235041625 235072655 enh12798
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs908320[chr1:235061973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235058866 235063947 ZNF274 GTRD no Liver (HepG2) 21400362
chr1 235058866 235063947 ZNF274 GTRD no Liver (HepG2) 107883952
chr1 235060458 235062105 ZNF274 GTRD no Liver (HepG2) 21400405
chr1 235060822 235062114 ZNF274 GTRD no Blood (GM12878) 21400432
chr1 235060892 235062083 ZNF274 GTRD no Blood (GM12878) 21400435
chr1 235061512 235062108 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21400446
chr1 235061687 235062123 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21400457
chr1 235061907 235062989 ZNF143 GTRD no Epithelial (MCF-7) 21400463
chr1 235061907 235062989 ZNF143 GTRD no Epithelial (MCF-7) 107883953
Genes associated with rs908320[chr1:235061973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 234740015 234745271 - IRF2BP2 ENSG00000168264.6 234745271 316702 Spleen 0.20092 1964