EnhancerDB
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  3. rs922478[chr5:172228502]
Enhancers that have rs922478[chr5:172228502]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172228151 172228566 vista50177
VISTA
Transcript factors that have rs922478[chr5:172228502]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172228178 172228686 STAT3 UCSC Txn Factor no Conserved 108537515
chr5 172228210 172228585 FOS UCSC Txn Factor no Conserved 108537516
chr5 172228284 172228559 CEBPB UCSC Txn Factor no Conserved 108537517
chr5 172228494 172228502 FOXC1 JASPAR yes 67829032
chr5 172228494 172228502 FOXC1 JASPAR yes 70763683
Genes associated with rs922478[chr5:172228502], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More