EnhancerDB
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  3. rs9257004[chr6:30812760]
Enhancers that have rs9257004[chr6:30812760]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9257004[chr6:30812760]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30812754 30812775 IRF1 JASPAR yes 101058577
chr6 30812756 30812771 STAT2 JASPAR yes 101058578
chr6 30812757 30812778 IRF1 JASPAR yes 101058579
chr6 30812758 30812779 IRF1 JASPAR yes 101058580
chr6 30812759 30812774 FOXP1 JASPAR yes 101058581
chr6 30812759 30812780 IRF1 JASPAR yes 101058582
chr6 30812760 30812775 FOXP1 JASPAR yes 101058583
Genes associated with rs9257004[chr6:30812760], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More