EnhancerDB
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  3. rs9380196[chr6:30777648]
Enhancers that have rs9380196[chr6:30777648]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9380196[chr6:30777648]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30777628 30777648 ESR1 JASPAR yes 101053265
chr6 30777645 30777649 H1TF2 TRANSFAC yes 101053266
chr6 30777645 30777649 NFE TRANSFAC yes 101053267
chr6 30777645 30777649 SRF TRANSFAC yes 101053268
Genes associated with rs9380196[chr6:30777648], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More