EnhancerDB
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  3. rs9381287[chr6:44040640]
Enhancers that have rs9381287[chr6:44040640]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9381287[chr6:44040640]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44039982 44042697 POLR2A UCSC Txn Factor no Conserved 108540407
chr6 44040533 44040772 EBF1 UCSC Txn Factor no Conserved 108540408
chr6 44040629 44040644 ZIC3 JASPAR yes 101820698
chr6 44040636 44040651 PRDM1 JASPAR yes 101820699
chr6 44040637 44040651 PLAG1 JASPAR yes 101820700
chr6 44040637 44040652 NR2C2 JASPAR yes 101820701
chr6 44040638 44040652 RXRB JASPAR yes 101820702
chr6 44040638 44040652 RXRG JASPAR yes 101820703
chr6 44040638 44040659 IRF1 JASPAR yes 101820704
Genes associated with rs9381287[chr6:44040640], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More