EnhancerDB
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Enhancers that have rs940659[chr1:226875552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs940659[chr1:226875552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226873586 226876636 ZNF274 GTRD no Cervix (HeLa-S3) 21387187
chr1 226873586 226876636 ZNF274 GTRD no Cervix (HeLa-S3) 107876176
chr1 226873586 226876636 ZNF274 GTRD no Cervix (HeLa-S3) 107876177
chr1 226873712 226876837 ZNF274 GTRD no Bone Marrow (K562) 107876179
chr1 226873712 226876837 ZNF274 GTRD no Bone Marrow (K562) 107876180
chr1 226873712 226876837 ZNF274 GTRD no Bone Marrow (K562) 107876181
chr1 226875158 226876525 ZNF274 GTRD no Cervix (HeLa-S3) 21387191
chr1 226875158 226876525 ZNF274 GTRD no Cervix (HeLa-S3) 107876188
chr1 226875158 226876525 ZNF274 GTRD no Cervix (HeLa-S3) 107876189
chr1 226875165 226875637 CTCF UCSC Txn Factor no Conserved 107876190
chr1 226875173 226876525 ZNF274 GTRD no Bone Marrow (K562) 107876191
chr1 226875173 226876525 ZNF274 GTRD no Bone Marrow (K562) 107876192
chr1 226875235 226875595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387192
chr1 226875235 226875595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107876193
chr1 226875398 226876399 ZNF274 GTRD no Bone Marrow (K562) 107876196
chr1 226875473 226876501 ZNF274 GTRD no Bone Marrow (K562) 107876197
chr1 226875546 226875561 LEF1 JASPAR yes 35833123
Genes associated with rs940659[chr1:226875552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More