EnhancerDB
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  3. rs9426688[chr1:23451360]
Enhancers that have rs9426688[chr1:23451360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs9426688[chr1:23451360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23451343 23451364 IRF1 JASPAR yes 27415691
chr1 23451345 23451360 IRF9 JASPAR yes 27415692
chr1 23451346 23451360 IRF7 JASPAR yes 27415693
chr1 23451347 23451361 STAT1 JASPAR yes 27415694
chr1 23451347 23451362 STAT2 JASPAR yes 27415695
chr1 23451347 23451365 IRF2 JASPAR yes 27415696
Genes associated with rs9426688[chr1:23451360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More