EnhancerDB
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  3. rs9426689[chr1:23454721]
Enhancers that have rs9426689[chr1:23454721]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs9426689[chr1:23454721]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23454705 23454726 IRF1 JASPAR yes 27416182
chr1 23454710 23454725 FOXP1 JASPAR yes 27416184
chr1 23454712 23454724 FOXC2 JASPAR yes 27416185
chr1 23454713 23454724 FOXP2 JASPAR yes 27416186
chr1 23454713 23454727 STAT1 JASPAR yes 27416187
Genes associated with rs9426689[chr1:23454721], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More