EnhancerDB
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  3. rs9438565[chr1:27780496]
Enhancers that have rs9438565[chr1:27780496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9438565[chr1:27780496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27780493 27780503 TBX21 JASPAR yes 27696322
chr1 27780494 27780502 MGA JASPAR yes 27696323
chr1 27780494 27780502 TBX1 JASPAR yes 27696324
Genes associated with rs9438565[chr1:27780496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More