EnhancerDB
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  3. rs9450782[chr6:88434390]
Enhancers that have rs9450782[chr6:88434390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs9450782[chr6:88434390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88434385 88434391 YY1 JASPAR yes 103325214
chr6 88434387 88434398 TBX20 JASPAR yes 103325215
chr6 88434388 88434398 TBX21 JASPAR yes 103325216
chr6 88434389 88434397 MGA JASPAR yes 103325217
chr6 88434389 88434397 TBX15 JASPAR yes 103325218
chr6 88434389 88434397 TBX1 JASPAR yes 103325219
chr6 88434389 88434397 TBX4 JASPAR yes 103325220
chr6 88434389 88434397 TBX5 JASPAR yes 103325221
Genes associated with rs9450782[chr6:88434390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More