EnhancerDB
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  3. rs9450784[chr6:88440035]
Enhancers that have rs9450784[chr6:88440035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs9450784[chr6:88440035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88440026 88440044 E2F3 JASPAR yes 103326120
chr6 88440029 88440043 IRF7 JASPAR yes 103326121
chr6 88440031 88440052 IRF1 JASPAR yes 103326122
chr6 88440033 88440048 PRDM1 JASPAR yes 103326123
chr6 88440033 88440048 STAT2 JASPAR yes 103326124
chr6 88440035 88440049 IRF7 JASPAR yes 103326125
chr6 88440035 88440049 IRF8 JASPAR yes 103326126
chr6 88440035 88440050 IRF9 JASPAR yes 103326127
Genes associated with rs9450784[chr6:88440035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More